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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs114562368 chr1:45899178 G/A 2.66E-9 486 16.37 13.7 10.57 KM Plot
THCA rs11462803 chr1:22393192 A/AT 0.00013 487 15.88 17.63 14.97 KM Plot
THCA rs114638934 chr17:13932251 C/T 4.68E-7 479 15.07 17.25 17.77 KM Plot
THCA rs114687023 chr6:24468652 A/G 0 483 16.48 14.8 8.88 KM Plot
THCA rs11470320 chr20:61487680 AAAG/A 5.03E-5 480 15.07 17.23 14.55 KM Plot
THCA rs1147098 chr12:65015244 G/A 0.00032 467 15.17 15.93 16.13 KM Plot
THCA rs114943851 chr19:34413719 T/C 5.01E-7 481 15.9 15.83 17.13 KM Plot
THCA rs114966520 chr2:241541811 C/T 2.16E-11 484 15.9 15.42 19.27 KM Plot
THCA rs114991249 chr1:91825884 C/T 7.73E-6 490 15.67 17 17.77 KM Plot
THCA rs115073882 chr7:76410701 C/T 2.74E-9 484 15.32 16.95 15.15 KM Plot
THCA rs115104938 chr2:241522819 G/T 2.09E-11 484 15.9 15.42 19.27 KM Plot
THCA rs1151404 chr13:108858671 G/C 2.36E-9 481 15.63 17.37 14.22 KM Plot
THCA rs11519343 chr12:9436282 T/C 0.000266 482 15.32 17 16.82 KM Plot
THCA rs115379040 chr1:224382833 C/T 7.75E-5 488 16.73 14.63 13.8 KM Plot
THCA rs11537982 chr6:99323424 C/T 1.98E-5 490 15.63 18.45 25.13 KM Plot